Massive fan so it's hard to choose. I agree about Pulse though, even though I'm more of a Roger fan. Final Cut is brilliant, but I'm probably in minority there. DSOTM, yes but probably the pulse version rather than the studio one. WYWH and Animals are favorits as well - Dogs is probably one of my favorite tracks, but there are loads.
I really couldn't pass on Live 8 y'know. The only time the entire Pink Floyd, sans Barrett of course, performed in my lifetime felt to big to miss. Flew to London with a mate and payed shitloads for a ticket but it was well worth it. =)