Bury have been ordered to play two home games behind closed doors for offensive comments made by supporters during a match at Gigg Lane.
The punishment, and a £350 fine, were imposed following the incidents at a North West Counties Premier Division game with West Didsbury & Chorlton.
The charge related to alleged racist and homophobic language and behaviour.
Bury said in a statement, external that they intend to appeal against the "excessive" punishment.
The Shakers, who said they "accepted the facts of the incident", claimed that the comments were only made by two fans at the game in September.